matlab function cmdscale Search Results


classical mds  (MathWorks Inc)
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MathWorks Inc classical mds
(a). Opposing effects of fumin and dumb 2 on dopamine (DA) function and sleep. Released DA impacts DA1 receptors to initiate cAMP signaling pathways (left black arrow) before being recycled back into the cell (red arrow). fumin is mutant for the DA transporter, leading to increased DA levels in the synapse, and consequently increases cAMP signaling in post-synaptic neurons (right thick black arrow). dumb 2 is mutant for the DA1 receptor, leading to decreased cAMP signaling (dashed black arrow). (b). Classical beam-crossing sleep profiles (min sleep/hour (±SEM)) based on a 5 min inactivity criterion, for the w 2202 background strain (blue), fumin (red), dumb 2 (green), and the double mutant fumin ; dumb 2 (black). N = 68 for w 2202 ; N = 67 for fumin ; N = 62 for dumb 2 ; N = 66 for fumin ; dumb 2 . The w 2202 profile is shown in grey for comparison in the three mutant panels. (c). Sleep intensity profiles (% reactive ± SEM) for the same four strains as in b. (d). <t>Multidimensional</t> <t>scaling</t> <t>(MDS)</t> was used to project the data into a two-dimensional space for easier visualization of the multidimensional relationships between different strains. MDS analyses were performed for fumin ; dumb 2 (blue border) compared to its genetic background strain, w 2202 (black border), for daytime (yellow) and nighttime (grey) metrics. Left panel: four beam-crossing metrics (as for b) were used in combination for MDS comparing both strains. The different metrics used are indicated in the green box (bottom of the panel). The daytime effects overlap while the nighttime effects are distinct. Right panel: four arousal-based metrics were combined with four beam-crossing sleep metrics (indicated by the larger magenta box) for MDS analyses, resulting in a complete separation between day and night effects in both strains. a.u., arbitrary units.
Classical Mds, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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cmdscale  (MathWorks Inc)
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MathWorks Inc cmdscale
(a). Opposing effects of fumin and dumb 2 on dopamine (DA) function and sleep. Released DA impacts DA1 receptors to initiate cAMP signaling pathways (left black arrow) before being recycled back into the cell (red arrow). fumin is mutant for the DA transporter, leading to increased DA levels in the synapse, and consequently increases cAMP signaling in post-synaptic neurons (right thick black arrow). dumb 2 is mutant for the DA1 receptor, leading to decreased cAMP signaling (dashed black arrow). (b). Classical beam-crossing sleep profiles (min sleep/hour (±SEM)) based on a 5 min inactivity criterion, for the w 2202 background strain (blue), fumin (red), dumb 2 (green), and the double mutant fumin ; dumb 2 (black). N = 68 for w 2202 ; N = 67 for fumin ; N = 62 for dumb 2 ; N = 66 for fumin ; dumb 2 . The w 2202 profile is shown in grey for comparison in the three mutant panels. (c). Sleep intensity profiles (% reactive ± SEM) for the same four strains as in b. (d). <t>Multidimensional</t> <t>scaling</t> <t>(MDS)</t> was used to project the data into a two-dimensional space for easier visualization of the multidimensional relationships between different strains. MDS analyses were performed for fumin ; dumb 2 (blue border) compared to its genetic background strain, w 2202 (black border), for daytime (yellow) and nighttime (grey) metrics. Left panel: four beam-crossing metrics (as for b) were used in combination for MDS comparing both strains. The different metrics used are indicated in the green box (bottom of the panel). The daytime effects overlap while the nighttime effects are distinct. Right panel: four arousal-based metrics were combined with four beam-crossing sleep metrics (indicated by the larger magenta box) for MDS analyses, resulting in a complete separation between day and night effects in both strains. a.u., arbitrary units.
Cmdscale, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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cmdscale function  (MathWorks Inc)
90
MathWorks Inc cmdscale function
(a). Opposing effects of fumin and dumb 2 on dopamine (DA) function and sleep. Released DA impacts DA1 receptors to initiate cAMP signaling pathways (left black arrow) before being recycled back into the cell (red arrow). fumin is mutant for the DA transporter, leading to increased DA levels in the synapse, and consequently increases cAMP signaling in post-synaptic neurons (right thick black arrow). dumb 2 is mutant for the DA1 receptor, leading to decreased cAMP signaling (dashed black arrow). (b). Classical beam-crossing sleep profiles (min sleep/hour (±SEM)) based on a 5 min inactivity criterion, for the w 2202 background strain (blue), fumin (red), dumb 2 (green), and the double mutant fumin ; dumb 2 (black). N = 68 for w 2202 ; N = 67 for fumin ; N = 62 for dumb 2 ; N = 66 for fumin ; dumb 2 . The w 2202 profile is shown in grey for comparison in the three mutant panels. (c). Sleep intensity profiles (% reactive ± SEM) for the same four strains as in b. (d). <t>Multidimensional</t> <t>scaling</t> <t>(MDS)</t> was used to project the data into a two-dimensional space for easier visualization of the multidimensional relationships between different strains. MDS analyses were performed for fumin ; dumb 2 (blue border) compared to its genetic background strain, w 2202 (black border), for daytime (yellow) and nighttime (grey) metrics. Left panel: four beam-crossing metrics (as for b) were used in combination for MDS comparing both strains. The different metrics used are indicated in the green box (bottom of the panel). The daytime effects overlap while the nighttime effects are distinct. Right panel: four arousal-based metrics were combined with four beam-crossing sleep metrics (indicated by the larger magenta box) for MDS analyses, resulting in a complete separation between day and night effects in both strains. a.u., arbitrary units.
Cmdscale Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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matlab function cmdscale  (MathWorks Inc)
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MathWorks Inc matlab function cmdscale
(a). Opposing effects of fumin and dumb 2 on dopamine (DA) function and sleep. Released DA impacts DA1 receptors to initiate cAMP signaling pathways (left black arrow) before being recycled back into the cell (red arrow). fumin is mutant for the DA transporter, leading to increased DA levels in the synapse, and consequently increases cAMP signaling in post-synaptic neurons (right thick black arrow). dumb 2 is mutant for the DA1 receptor, leading to decreased cAMP signaling (dashed black arrow). (b). Classical beam-crossing sleep profiles (min sleep/hour (±SEM)) based on a 5 min inactivity criterion, for the w 2202 background strain (blue), fumin (red), dumb 2 (green), and the double mutant fumin ; dumb 2 (black). N = 68 for w 2202 ; N = 67 for fumin ; N = 62 for dumb 2 ; N = 66 for fumin ; dumb 2 . The w 2202 profile is shown in grey for comparison in the three mutant panels. (c). Sleep intensity profiles (% reactive ± SEM) for the same four strains as in b. (d). <t>Multidimensional</t> <t>scaling</t> <t>(MDS)</t> was used to project the data into a two-dimensional space for easier visualization of the multidimensional relationships between different strains. MDS analyses were performed for fumin ; dumb 2 (blue border) compared to its genetic background strain, w 2202 (black border), for daytime (yellow) and nighttime (grey) metrics. Left panel: four beam-crossing metrics (as for b) were used in combination for MDS comparing both strains. The different metrics used are indicated in the green box (bottom of the panel). The daytime effects overlap while the nighttime effects are distinct. Right panel: four arousal-based metrics were combined with four beam-crossing sleep metrics (indicated by the larger magenta box) for MDS analyses, resulting in a complete separation between day and night effects in both strains. a.u., arbitrary units.
Matlab Function Cmdscale, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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cmdscale.m function  (MathWorks Inc)
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MathWorks Inc cmdscale.m function
(a). Opposing effects of fumin and dumb 2 on dopamine (DA) function and sleep. Released DA impacts DA1 receptors to initiate cAMP signaling pathways (left black arrow) before being recycled back into the cell (red arrow). fumin is mutant for the DA transporter, leading to increased DA levels in the synapse, and consequently increases cAMP signaling in post-synaptic neurons (right thick black arrow). dumb 2 is mutant for the DA1 receptor, leading to decreased cAMP signaling (dashed black arrow). (b). Classical beam-crossing sleep profiles (min sleep/hour (±SEM)) based on a 5 min inactivity criterion, for the w 2202 background strain (blue), fumin (red), dumb 2 (green), and the double mutant fumin ; dumb 2 (black). N = 68 for w 2202 ; N = 67 for fumin ; N = 62 for dumb 2 ; N = 66 for fumin ; dumb 2 . The w 2202 profile is shown in grey for comparison in the three mutant panels. (c). Sleep intensity profiles (% reactive ± SEM) for the same four strains as in b. (d). <t>Multidimensional</t> <t>scaling</t> <t>(MDS)</t> was used to project the data into a two-dimensional space for easier visualization of the multidimensional relationships between different strains. MDS analyses were performed for fumin ; dumb 2 (blue border) compared to its genetic background strain, w 2202 (black border), for daytime (yellow) and nighttime (grey) metrics. Left panel: four beam-crossing metrics (as for b) were used in combination for MDS comparing both strains. The different metrics used are indicated in the green box (bottom of the panel). The daytime effects overlap while the nighttime effects are distinct. Right panel: four arousal-based metrics were combined with four beam-crossing sleep metrics (indicated by the larger magenta box) for MDS analyses, resulting in a complete separation between day and night effects in both strains. a.u., arbitrary units.
Cmdscale.M Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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function cmdscale (2016a)  (MathWorks Inc)
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MathWorks Inc function cmdscale (2016a)
(a). Opposing effects of fumin and dumb 2 on dopamine (DA) function and sleep. Released DA impacts DA1 receptors to initiate cAMP signaling pathways (left black arrow) before being recycled back into the cell (red arrow). fumin is mutant for the DA transporter, leading to increased DA levels in the synapse, and consequently increases cAMP signaling in post-synaptic neurons (right thick black arrow). dumb 2 is mutant for the DA1 receptor, leading to decreased cAMP signaling (dashed black arrow). (b). Classical beam-crossing sleep profiles (min sleep/hour (±SEM)) based on a 5 min inactivity criterion, for the w 2202 background strain (blue), fumin (red), dumb 2 (green), and the double mutant fumin ; dumb 2 (black). N = 68 for w 2202 ; N = 67 for fumin ; N = 62 for dumb 2 ; N = 66 for fumin ; dumb 2 . The w 2202 profile is shown in grey for comparison in the three mutant panels. (c). Sleep intensity profiles (% reactive ± SEM) for the same four strains as in b. (d). <t>Multidimensional</t> <t>scaling</t> <t>(MDS)</t> was used to project the data into a two-dimensional space for easier visualization of the multidimensional relationships between different strains. MDS analyses were performed for fumin ; dumb 2 (blue border) compared to its genetic background strain, w 2202 (black border), for daytime (yellow) and nighttime (grey) metrics. Left panel: four beam-crossing metrics (as for b) were used in combination for MDS comparing both strains. The different metrics used are indicated in the green box (bottom of the panel). The daytime effects overlap while the nighttime effects are distinct. Right panel: four arousal-based metrics were combined with four beam-crossing sleep metrics (indicated by the larger magenta box) for MDS analyses, resulting in a complete separation between day and night effects in both strains. a.u., arbitrary units.
Function Cmdscale (2016a), supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


(a). Opposing effects of fumin and dumb 2 on dopamine (DA) function and sleep. Released DA impacts DA1 receptors to initiate cAMP signaling pathways (left black arrow) before being recycled back into the cell (red arrow). fumin is mutant for the DA transporter, leading to increased DA levels in the synapse, and consequently increases cAMP signaling in post-synaptic neurons (right thick black arrow). dumb 2 is mutant for the DA1 receptor, leading to decreased cAMP signaling (dashed black arrow). (b). Classical beam-crossing sleep profiles (min sleep/hour (±SEM)) based on a 5 min inactivity criterion, for the w 2202 background strain (blue), fumin (red), dumb 2 (green), and the double mutant fumin ; dumb 2 (black). N = 68 for w 2202 ; N = 67 for fumin ; N = 62 for dumb 2 ; N = 66 for fumin ; dumb 2 . The w 2202 profile is shown in grey for comparison in the three mutant panels. (c). Sleep intensity profiles (% reactive ± SEM) for the same four strains as in b. (d). Multidimensional scaling (MDS) was used to project the data into a two-dimensional space for easier visualization of the multidimensional relationships between different strains. MDS analyses were performed for fumin ; dumb 2 (blue border) compared to its genetic background strain, w 2202 (black border), for daytime (yellow) and nighttime (grey) metrics. Left panel: four beam-crossing metrics (as for b) were used in combination for MDS comparing both strains. The different metrics used are indicated in the green box (bottom of the panel). The daytime effects overlap while the nighttime effects are distinct. Right panel: four arousal-based metrics were combined with four beam-crossing sleep metrics (indicated by the larger magenta box) for MDS analyses, resulting in a complete separation between day and night effects in both strains. a.u., arbitrary units.

Journal: Scientific Reports

Article Title: How deeply does your mutant sleep? Probing arousal to better understand sleep defects in Drosophila

doi: 10.1038/srep08454

Figure Lengend Snippet: (a). Opposing effects of fumin and dumb 2 on dopamine (DA) function and sleep. Released DA impacts DA1 receptors to initiate cAMP signaling pathways (left black arrow) before being recycled back into the cell (red arrow). fumin is mutant for the DA transporter, leading to increased DA levels in the synapse, and consequently increases cAMP signaling in post-synaptic neurons (right thick black arrow). dumb 2 is mutant for the DA1 receptor, leading to decreased cAMP signaling (dashed black arrow). (b). Classical beam-crossing sleep profiles (min sleep/hour (±SEM)) based on a 5 min inactivity criterion, for the w 2202 background strain (blue), fumin (red), dumb 2 (green), and the double mutant fumin ; dumb 2 (black). N = 68 for w 2202 ; N = 67 for fumin ; N = 62 for dumb 2 ; N = 66 for fumin ; dumb 2 . The w 2202 profile is shown in grey for comparison in the three mutant panels. (c). Sleep intensity profiles (% reactive ± SEM) for the same four strains as in b. (d). Multidimensional scaling (MDS) was used to project the data into a two-dimensional space for easier visualization of the multidimensional relationships between different strains. MDS analyses were performed for fumin ; dumb 2 (blue border) compared to its genetic background strain, w 2202 (black border), for daytime (yellow) and nighttime (grey) metrics. Left panel: four beam-crossing metrics (as for b) were used in combination for MDS comparing both strains. The different metrics used are indicated in the green box (bottom of the panel). The daytime effects overlap while the nighttime effects are distinct. Right panel: four arousal-based metrics were combined with four beam-crossing sleep metrics (indicated by the larger magenta box) for MDS analyses, resulting in a complete separation between day and night effects in both strains. a.u., arbitrary units.

Article Snippet: The MDS algorithms used within DART are Classical MDS (using the Matlab function cmdscale ) and Non-Classical Metric/Non-Metric MDS (using the Matlab function mdscale ).

Techniques: Protein-Protein interactions, Mutagenesis, Comparison